3NXA
X-ray structure of the apo form of human S100A16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7A |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-28 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.00600 |
Spacegroup name | P 61 |
Unit cell lengths | 156.571, 156.571, 38.138 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.150 - 2.100 |
R-factor | 0.25233 |
Rwork | 0.248 |
R-free | 0.29843 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Previously solved low resolution SAD structure |
RMSD bond length | 0.073 |
RMSD bond angle | 4.450 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.092 | 0.339 |
Number of reflections | 29230 | |
<I/σ(I)> | 17.1 | 3.3 |
Completeness [%] | 91.6 | 79.4 |
Redundancy | 11.7 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 293 | 0.2 M tri-sodium potassium citrate, 20% PEG 3350, pH 8.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |