3NPU
Optimization of the in silico designed Kemp eliminase KE70 by computational design and directed evolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-22 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.222, 53.295, 81.846 |
Unit cell angles | 90.00, 110.19, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.250 |
R-factor | 0.19198 |
Rwork | 0.189 |
R-free | 0.24116 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jcj |
RMSD bond length | 0.020 |
RMSD bond angle | 1.733 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.081 | 0.217 |
Number of reflections | 23599 | |
<I/σ(I)> | 22.28 | 4.8 |
Completeness [%] | 97.8 | 83.8 |
Redundancy | 6.5 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 292 | 0.2M NaF, 0.1M Bis Tris Propane, 20% PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 292K |