3NPE
Structure of VP14 in complex with oxygen
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-12-13 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.97989 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 161.521, 161.521, 150.816 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.300 - 3.200 |
R-factor | 0.2422 |
Rwork | 0.241 |
R-free | 0.27164 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.466 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.03) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.075 | 0.027 | |
Number of reflections | 23752 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 99.9 | 99.6 | 99.7 |
Redundancy | 18.5 | 18.4 | 10.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop | 7.5 | 298 | PEG 4000, Li sulfate, dioxane, 1,6 hexandiol, pH 7.5, hanging drop, temperature 298K |