Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NMJ

Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2009-07-24
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameP 65
Unit cell lengths99.291, 99.291, 109.317
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution85.990 - 3.100
R-factor0.1963
Rwork0.193
R-free0.23820
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.742
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.9)
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]85.99085.9893.270
High resolution limit [Å]3.1009.8003.100
Rmerge0.0520.433
Total number of observations350815850
Number of reflections11200
<I/σ(I)>88.81.4
Completeness [%]100.099.8100
Redundancy9.99.39.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529830% PEG 400, 0.1 M Tris, 0.2 ammonium sulfate, 6.2 mM nickel sulfate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon