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3NK9

Crystal structure of Staphylococcal nuclease variant Delta+PHS V74A at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
Collection date2010-01-25
DetectorADSC QUANTUM 315
Wavelength(s)1.1000
Spacegroup nameP 1 21 1
Unit cell lengths31.075, 60.435, 38.129
Unit cell angles90.00, 93.30, 90.00
Refinement procedure
Resolution30.220 - 1.650
R-factor0.1855
Rwork0.181
R-free0.22430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3BDC with all H2Os Ca2+ and THP removed and the following truncations: H8A T13A Q30A K64A V74A T82A Y113A V114A and Y115A; all b-factors were reset to 20 A^2.
RMSD bond length0.015
RMSD bond angle1.611
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.680
High resolution limit [Å]1.6504.4801.650
Rmerge0.0460.0380.183
Number of reflections16836
<I/σ(I)>22.3
Completeness [%]98.889.796
Redundancy7.26.86.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP827722% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 8.0, vapor diffusion, hanging drop, temperature 277K

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