3NFV
Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-13 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.115, 54.133, 75.361 |
Unit cell angles | 90.00, 105.49, 90.00 |
Refinement procedure
Resolution | 43.402 - 1.950 |
R-factor | 0.158 |
Rwork | 0.156 |
R-free | 0.19800 |
Structure solution method | SAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.435 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.402 | 43.402 | 2.020 |
High resolution limit [Å] | 1.950 | 4.190 | 1.950 |
Rmerge | 0.101 | 0.058 | 0.470 |
Number of reflections | 31230 | 3226 | 3082 |
<I/σ(I)> | 8.83 | 19.1 | 2.3 |
Completeness [%] | 99.2 | 98.8 | 97.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20.000000000% iso-Propanol, 20.000000000% PEG-4000, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |