Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NFM

Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]77
Detector technologyCCD
Collection date2010-05-13
DetectorMARRESEARCH
Wavelength(s)0.97
Spacegroup nameH 3
Unit cell lengths129.850, 129.850, 40.420
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution64.920 - 2.500
R-factor0.22005
Rwork0.218
R-free0.26471
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1aha
RMSD bond length0.009
RMSD bond angle1.744
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.0002.560
High resolution limit [Å]2.5002.500
Rmerge0.0870.146
Number of reflections8728
<I/σ(I)>7.63.9
Completeness [%]99.599.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.729814% PEG6000, 0.1M Sodium Phosphate, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon