Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NEA

Crystal Structure of Peptidyl-tRNA hydrolase from Francisella tularensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2007-08-28
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths60.683, 93.043, 33.027
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.030 - 2.250
R-factor0.193
Rwork0.190
R-free0.24800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2pth
RMSD bond length0.013
RMSD bond angle1.291
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (refmac_5.5.0109)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.330
High resolution limit [Å]2.2504.8502.250
Rmerge0.1400.0650.490
Number of reflections9412
<I/σ(I)>6
Completeness [%]100.099.7100
Redundancy6.66.16.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
1VAPOR DIFFUSION, SITTING DROP6.529525% PEG3350, 0.2M MgCl2, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon