3NDY
The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans
Replaces: 3ICGExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.297, 119.050, 198.487 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.219 - 2.100 |
R-factor | 0.149 |
Rwork | 0.147 |
R-free | 0.19500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.009 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.5_2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.150 |
High resolution limit [Å] | 2.100 | 5.180 | 2.100 |
Rmerge | 0.117 | 0.042 | 0.456 |
Number of reflections | 118365 | ||
<I/σ(I)> | 7.3 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 5 | 4.8 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 277 | 27% Polyethylene glycol 3350, 0.1 M BisTris pH 5.5. Cryoprotected with 29% Polyethylene glycol 3350, 5% ethylene glycol, 0.1 M BisTris pH 5.5, vapor diffusion, hanging drop, temperature 277K, VAPOR DIFFUSION, HANGING DROP |