3NBW
X-ray structure of ketohexokinase in complex with a pyrazole compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-07-20 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.701, 85.630, 136.598 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.720 - 2.341 |
R-factor | 0.2271 |
Rwork | 0.225 |
R-free | 0.27410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nbv |
RMSD bond length | 0.008 |
RMSD bond angle | 1.176 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.860 | 2.420 |
High resolution limit [Å] | 2.340 | 2.340 |
Rmerge | 0.053 | |
Number of reflections | 39280 | |
<I/σ(I)> | 16.1 | 4.1 |
Completeness [%] | 94.4 | 78.8 |
Redundancy | 4.72 | 2.57 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 295 | 17% PEg 8k, 0.1M Na-Citrate, 0.2M Ammonium Sulfate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K |