Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NBW

X-ray structure of ketohexokinase in complex with a pyrazole compound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyCCD
Collection date2007-07-20
DetectorMAR CCD 165 mm
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths82.701, 85.630, 136.598
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.720 - 2.341
R-factor0.2271
Rwork0.225
R-free0.27410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3nbv
RMSD bond length0.008
RMSD bond angle1.176
Data reduction softwared*TREK
Data scaling softwared*TREK
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.5_2))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.8602.420
High resolution limit [Å]2.3402.340
Rmerge0.053
Number of reflections39280
<I/σ(I)>16.14.1
Completeness [%]94.478.8
Redundancy4.722.57
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529517% PEg 8k, 0.1M Na-Citrate, 0.2M Ammonium Sulfate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon