3MRI
Crystal Structure of MHC class I HLA-A2 molecule complexed with HCV NS3-1073-1081 nonapeptide G4M-V5W variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-03-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.8726 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.407, 80.506, 55.904 |
Unit cell angles | 90.00, 112.44, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.100 |
R-factor | 0.239 |
Rwork | 0.239 |
R-free | 0.29600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mrg |
RMSD bond length | 0.011 |
RMSD bond angle | 1.305 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.170 | |
High resolution limit [Å] | 2.100 | 8.130 | 2.100 |
Rmerge | 0.107 | 0.040 | 0.460 |
Number of reflections | 25056 | 445 | 2331 |
<I/σ(I)> | 8.71 | 22.5 | 2.8 |
Completeness [%] | 99.5 | 97.2 | 99.9 |
Redundancy | 3.73 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 9% PEG 6000, 0.1M NaCitrate, 0.1M NaCl, 5mg/ml protein conc., pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |