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3MJ3

Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to selenate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Wavelength(s)0.9756
Spacegroup nameP 41 21 2
Unit cell lengths59.260, 59.260, 99.775
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 3.100
Rwork0.227
R-free0.26300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3b31
RMSD bond length0.006
RMSD bond angle1.395
Refinement softwareCNS
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]3.100
Number of reflections3580
Completeness [%]99.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.52931.4 M lithium sulfate, 42.5 mM Magnesium chloride, 0.5 mM spermidine, 10 mM HEPES-KOH, 50 mM HEPES-NaOH; transferred to saturated lithium selenate, 42.5 mM Magnesium chloride, 0.5 mM spermidine, 10 mM HEPES-KOH, 50 mM HEPES-NaOH for cryo-protection, pH 7.5, VAPOR DIFFUSION, temperature 293K

220113

PDB entries from 2024-05-22

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