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3MDX

Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, rhombohedral crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2010-02-26
DetectorADSC QUANTUM 315r
Spacegroup nameH 3
Unit cell lengths67.880, 67.880, 95.890
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 1.450
R-factor0.151
Rwork0.150
R-free0.16700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3mbq orthorhombic crystal form
RMSD bond length0.017
RMSD bond angle1.683
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.1201.490
High resolution limit [Å]1.4501.450
Rmerge0.0290.467
Number of reflections29143
<I/σ(I)>30.13.2
Completeness [%]99.8100
Redundancy4.64.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.4290MD PACT SCREEN, E12: 20% PEG 3350, 200MM NA MALONATE, BRABA.10050.A AT 9.7MG/ML, pH 7.40, VAPOR DIFFUSION, SITTING DROP, temperature 290K

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