Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3M05

The crystal structure of a functionally unknown protein PEPE_1480 from Pediococcus pentosaceus ATCC 25745

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2010-02-04
DetectorADSC QUANTUM 315r
Wavelength(s)0.97937, 0.97951
Spacegroup nameP 43 21 2
Unit cell lengths119.774, 119.774, 119.349
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.862 - 3.145
R-factor0.1985
Rwork0.196
R-free0.24680
Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle1.295
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareSHELXD
Refinement softwarePHENIX ((phenix.refine: 1.5_2))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.8623.200
High resolution limit [Å]3.1453.150
Rmerge0.1090.804
Number of reflections15624
<I/σ(I)>27.22.4
Completeness [%]99.7100
Redundancy77.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62770.2M Li2SO4, 0.1M MES, 20% (v/v)1,4-butanodiol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon