3M05
The crystal structure of a functionally unknown protein PEPE_1480 from Pediococcus pentosaceus ATCC 25745
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97937, 0.97951 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 119.774, 119.774, 119.349 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.862 - 3.145 |
R-factor | 0.1985 |
Rwork | 0.196 |
R-free | 0.24680 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.295 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | SHELXD |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.862 | 3.200 |
High resolution limit [Å] | 3.145 | 3.150 |
Rmerge | 0.109 | 0.804 |
Number of reflections | 15624 | |
<I/σ(I)> | 27.2 | 2.4 |
Completeness [%] | 99.7 | 100 |
Redundancy | 7 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | 0.2M Li2SO4, 0.1M MES, 20% (v/v)1,4-butanodiol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |