3LQW
Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Entamoeba histolytica
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-24 |
Detector | ADSC QUANTUM 315r |
Spacegroup name | H 3 |
Unit cell lengths | 63.140, 63.140, 108.370 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.820 - 1.300 |
R-factor | 0.133 |
Rwork | 0.132 |
R-free | 0.15500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hva modified with CCP4 program CHAINSAW |
RMSD bond length | 0.018 |
RMSD bond angle | 1.772 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.330 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.050 | 0.290 |
Number of reflections | 39194 | |
<I/σ(I)> | 19.65 | 3.7 |
Completeness [%] | 98.8 | 91.5 |
Redundancy | 5.9 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 290 | MD PACT SCREEN CONDITION D9: 100MM TRIS, 20% PEG 6000, 200MM LICL, ENHIA.01206.A AT 3.8 MG/ML, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |