3LF6
Crystal structure of HIV epitope-scaffold 4E10_1XIZA_S0_001_N
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 107 |
| Detector technology | IMAGE PLATE |
| Collection date | 2008-01-03 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 49.211, 81.975, 94.219 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.500 - 1.900 |
| R-factor | 0.22615 |
| Rwork | 0.223 |
| R-free | 0.27917 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | Computationally-derived model of the epitope-scaffold based on 1XIZ |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.056 |
| Data reduction software | d*TREK |
| Data scaling software | d*TREK |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.210 | 1.970 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.057 | 0.341 |
| Number of reflections | 30053 | |
| <I/σ(I)> | 17.2 | 2.6 |
| Completeness [%] | 97.5 | 95.2 |
| Redundancy | 4.43 | 4.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | DI-AMMONIUM PHOSPHATE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |






