3LF6
Crystal structure of HIV epitope-scaffold 4E10_1XIZA_S0_001_N
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 107 |
Detector technology | IMAGE PLATE |
Collection date | 2008-01-03 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.211, 81.975, 94.219 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.500 - 1.900 |
R-factor | 0.22615 |
Rwork | 0.223 |
R-free | 0.27917 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Computationally-derived model of the epitope-scaffold based on 1XIZ |
RMSD bond length | 0.009 |
RMSD bond angle | 1.056 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.210 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.057 | 0.341 |
Number of reflections | 30053 | |
<I/σ(I)> | 17.2 | 2.6 |
Completeness [%] | 97.5 | 95.2 |
Redundancy | 4.43 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | DI-AMMONIUM PHOSPHATE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |