3L5O
Crystal structure of protein with unknown function from DUF364 family (ZP_00559375.1) from Desulfitobacterium hafniense DCB-2 at 2.01 A resolution
Replaces: 2H1QExperimental procedure
Experimental method | SAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-29 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 61 |
Unit cell lengths | 120.640, 120.640, 75.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.977 - 2.010 |
R-factor | 0.173 |
Rwork | 0.171 |
R-free | 0.21500 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.428 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.977 | 2.080 | |
High resolution limit [Å] | 2.010 | 4.320 | 2.010 |
Rmerge | 0.059 | 0.039 | 0.668 |
Rmeas | 0.066 | 0.042 | 0.815 |
Total number of observations | 311344 | ||
Number of reflections | 41624 | 8192 | 7832 |
<I/σ(I)> | 12.26 | 36.3 | 1.8 |
Completeness [%] | 99.7 | 99.2 | 98.1 |
Redundancy | 7.48 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277 | 1.0M LiCl, 0.1M citrate pH 5.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |