3L0D
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Detector technology | CCD |
Collection date | 2009-12-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 91.776, 91.776, 161.402 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.590 - 2.500 |
R-factor | 0.204 |
Rwork | 0.202 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3doc |
RMSD bond length | 0.013 |
RMSD bond angle | 1.454 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.082 | 0.590 |
Number of reflections | 26594 | |
<I/σ(I)> | 16.1 | 2.39 |
Completeness [%] | 94.8 | 96.2 |
Redundancy | 4.1 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | Hampton Research CSHT condition H4, 0.1 M Tris pH 8.5, 25% v/v tert-butanol, 23.7 mg/mL protein, crystal tracking ID 206078h4, VAPOR DIFFUSION, SITTING DROP, temperature 289K |