3KWK
Crystal structure of Putative NADH dehydrogenase/NAD(P)H nitroreductase (NP_809094.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.54 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-05-08 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 42.215, 42.215, 186.713 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.854 - 1.540 |
R-factor | 0.147 |
Rwork | 0.146 |
R-free | 0.17600 |
Structure solution method | SAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.564 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0072) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.854 | 29.850 | 1.580 |
High resolution limit [Å] | 1.540 | 6.890 | 1.540 |
Rmerge | 0.110 | 0.058 | 0.550 |
Total number of observations | 2043 | 5013 | |
Number of reflections | 25905 | ||
<I/σ(I)> | 11 | 10.1 | 1.4 |
Completeness [%] | 98.6 | 98.8 | 87.5 |
Redundancy | 6.2 | 5.3 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2000M NaOAc, 30.0000% PEG-4000, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |