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3KPS

Crystal Structure of the LC13 TCR in complex with HLA B*4405 bound to EEYLQAFTY a self peptide from the ABCD3 protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]100
Detector technologyCCD
Collection date2008-11-01
DetectorADSC QUANTUM 210r
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths142.518, 54.237, 121.766
Unit cell angles90.00, 114.43, 90.00
Refinement procedure
Resolution50.000 - 2.700
R-factor0.197
Rwork0.193
R-free0.26900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 1SYV and 1KGC
RMSD bond length0.009
RMSD bond angle1.202
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.800
High resolution limit [Å]2.7005.8102.700
Rmerge0.0710.0300.295
Number of reflections21530
<I/σ(I)>11.7
Completeness [%]92.010055.6
Redundancy3.33.62
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52770.2M NaOAc, 12-18% PEG 4000, 0.1M Tris, pH 8.5, vapor diffusion, hanging drop, temperature 277K

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