3KDC
Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I) in Complex with KNI-10074
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-07-16 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.310, 86.095, 46.369 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.280 - 2.200 |
R-factor | 0.17987 |
Rwork | 0.177 |
R-free | 0.23743 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1msm |
RMSD bond length | 0.007 |
RMSD bond angle | 1.238 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.300 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 12408 | |
<I/σ(I)> | 11.2 | 2.9 |
Completeness [%] | 99.8 | 100 |
Redundancy | 4.4 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 293 | citrate buffer pH 7.2, 100 mM DTT, 3mM NaN3 and 750 mM NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 293K |