3KCL
Room temperature neutron structure of D-Xylose Isomerase in complex with two Cd2+ cations and d12-D-alpha-glucose in the ring form (refined jointly with X-ray structure 3KBM)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | NUCLEAR REACTOR |
| Beamline | D19 |
| Temperature [K] | 293 |
| Detector technology | AREA DETECTOR |
| Collection date | 2009-04-05 |
| Detector | POSITION-SENSITIVE HE3 NEUTRON DETECTOR |
| Wavelength(s) | 2.422 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 94.196, 99.430, 102.986 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.000 - 2.000 |
| Rwork | 0.188 |
| R-free | 0.21100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3cwh |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.454 |
| Data reduction software | RETREAT |
| Data scaling software | RETREAT |
| Phasing software | nCNS |
| Refinement software | nCNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.100 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Number of reflections | 20875 | |
| <I/σ(I)> | 1.3 | |
| Completeness [%] | 72.0 | 76.3 |
| Redundancy | 1.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | 7.7 | 293 | 50MM HEPES, 40% v/v (NH4)2SO4 (sat.), protein 40 MG/ML, PH=7.7, BATCH METHOD, APO-XI CRYSTALS WERE WITH 5mM CDCL2 SALT, 0.5M PER-DEUTERATED D-GLUCOSE IN D2O, temperature 293K | |
| 1 | 7.7 | 293 | 50MM HEPES, 40% v/v (NH4)2SO4 (sat.), protein 40 MG/ML, PH=7.7, BATCH METHOD, APO-XI CRYSTALS WERE WITH 5mM CDCL2 SALT, 0.5M PER-DEUTERATED D-GLUCOSE IN D2O, temperature 293K |






