3KBN
Room temperature structure of D-Xylose Isomerase in complex with 2Ni(2+) co-factors and d12-D-glucose in the linear form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E DW |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Collection date | 2009-03-10 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 94.007, 99.669, 102.862 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.530 |
Rwork | 0.138 |
R-free | 0.18150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xib |
RMSD bond length | 0.012 |
RMSD bond angle | 0.028 |
Data reduction software | CrystalClear |
Data scaling software | CrystalClear |
Phasing software | SHELX |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.580 |
High resolution limit [Å] | 1.530 | 1.530 |
Number of reflections | 61655 | |
Completeness [%] | 85.0 | 93.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.7 | 290 | 40mg/ml protein, 5mM NiCl2, 500mM d12-D-glucose 30% (v/v) ammonium sulfate (sat.), pH 7.7, temperature 290K |