3K9F
Detailed structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-08-07 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97630 |
Spacegroup name | P 32 |
Unit cell lengths | 122.407, 122.407, 178.287 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.731 - 2.900 |
R-factor | 0.1867 |
Rwork | 0.183 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fof |
RMSD bond length | 0.010 |
RMSD bond angle | 1.403 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.074 | 0.422 |
Total number of observations | 366508 | |
Number of reflections | 64923 | |
<I/σ(I)> | 15.2 | 2.19 |
Completeness [%] | 98.1 | |
Redundancy | 5.6 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 5% isopropanol, optimised mixture of salts, 50mM Na cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |