3JYS
Crystal structure of SusD superfamily protein (YP_001298690.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-05-15 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97936 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 63.929, 63.929, 266.398 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.111 - 2.000 |
R-factor | 0.179 |
Rwork | 0.178 |
R-free | 0.19800 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.476 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0053) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.111 | 29.600 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.075 | 0.036 | 0.643 |
Total number of observations | 2956 | 20230 | |
Number of reflections | 38690 | ||
<I/σ(I)> | 16.8 | 16.7 | 1.2 |
Completeness [%] | 100.0 | 96.7 | 100 |
Redundancy | 7.1 | 5.6 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.8 | 277 | 0.2000M MgCl2, 20.0000% PEG-3350, No Buffer pH 5.8, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |