3JYO
Quinate dehydrogenase from Corynebacterium glutamicum in complex with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7B |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2007-02-06 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 0.8423 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 121.450, 63.280, 36.340 |
Unit cell angles | 90.00, 94.46, 90.00 |
Refinement procedure
Resolution | 10.000 - 1.000 |
R-factor | 0.16482 |
Rwork | 0.163 |
R-free | 0.19421 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nlo |
RMSD bond length | 0.017 |
RMSD bond angle | 1.764 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 10.000 | 1.040 |
High resolution limit [Å] | 1.000 | 1.000 |
Rmerge | 0.065 | 0.615 |
Number of reflections | 137551 | |
<I/σ(I)> | 34 | 2.05 |
Completeness [%] | 93.1 | 85.9 |
Redundancy | 3.8 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.9 | 293 | 1.6 M tri-sodium citrate, 0 up to 62.5 mM cobalt chloride, pH 6.9, VAPOR DIFFUSION, SITTING DROP, temperature 293K |