3IIB
Crystal structure of Peptidase M28 precursor (YP_926796.1) from SHEWANELLA AMAZONENSIS SB2B at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-04-17 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 90.442, 84.867, 80.114 |
Unit cell angles | 90.00, 115.85, 90.00 |
Refinement procedure
Resolution | 29.374 - 1.700 |
R-factor | 0.152 |
Rwork | 0.151 |
R-free | 0.18200 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.471 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0053) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.374 | 29.370 | 1.740 |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.120 | 0.063 | 0.462 |
Total number of observations | 1693 | 11090 | |
Number of reflections | 58230 | ||
<I/σ(I)> | 7.9 | 20 | 1.9 |
Completeness [%] | 97.4 | 97.7 | 96 |
Redundancy | 2.6 | 2.5 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2000M MgCl2, 30.0000% PEG-400, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |