3IEY
Crystal Structure of the functional Nanoarchaeum equitans tRNA splicing endonuclease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-08 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 1 |
Spacegroup name | I 41 |
Unit cell lengths | 124.102, 124.102, 69.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.900 - 2.110 |
R-factor | 0.23446 |
Rwork | 0.232 |
R-free | 0.25874 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a79 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.204 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.180 |
High resolution limit [Å] | 2.110 | 2.110 |
Rmerge | 0.064 | 0.305 |
Number of reflections | 21470 | |
<I/σ(I)> | 44.2 | 3.86 |
Completeness [%] | 81.6 | 81.6 |
Redundancy | 5.5 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 303 | 44% Tacsimate, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 303K |