3IA8
The structure of the C-terminal heme nitrobindin domain of THAP domain-containing protein 4 from Homo sapiens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.933, 74.694, 103.064 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.113 - 1.792 |
R-factor | 0.167 |
Rwork | 0.165 |
R-free | 0.20100 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.449 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.840 |
High resolution limit [Å] | 1.790 | 4.440 | 1.790 |
Rmerge | 0.093 | 0.050 | 0.457 |
Number of reflections | 29918 | ||
<I/σ(I)> | 9.5 | ||
Completeness [%] | 95.9 | 99.6 | 76.2 |
Redundancy | 5.8 | 5.6 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | Protein Solution (10 mg/ml MSE protein, 0.05 M NaCl, 0.0003 M TCEP, 0.005 M HEPES pH 5) mixed in a 1:1 ratio with the Well Solution (55% Polypropylene glycol 400, 0.1 M Triethanolamine pH 7.5). Cryoprotected with 55% Polypropylene glycol 400, 0.1 M Triethanolamine pH 7.5, vapor diffusion, hanging drop, temperature 277K |