3H95
Crystal structure of the NUDIX domain of NUDT6
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-01-30 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.979300 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 54.530, 54.530, 133.710 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 19.080 - 1.700 |
| R-factor | 0.19576 |
| Rwork | 0.194 |
| R-free | 0.22135 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1vcd |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.836 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | MrBUMP |
| Refinement software | REFMAC (5.5.0066) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.790 |
| High resolution limit [Å] | 1.690 | 1.690 |
| Rmerge | 0.059 | 0.574 |
| Number of reflections | 23294 | |
| <I/σ(I)> | 22.2 | 4.1 |
| Completeness [%] | 99.9 | 99.8 |
| Redundancy | 10.3 | 10.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 30% PEG 3350, 0.4M tri-ammonium citrate, 5mM magnesium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
