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3H8S

Structure of D19N T4 RNase H in the presence of divalent magnesium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths53.312, 75.298, 88.090
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.753 - 2.510
R-factor0.192
Rwork0.190
R-free0.23400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1TFR native T4 RNase H
RMSD bond length0.002
RMSD bond angle0.450
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.0002.590
High resolution limit [Å]2.5002.500
Rmerge0.0350.098
Number of reflections10519
<I/σ(I)>26.48.9
Completeness [%]83.155.2
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5295100 mM Na PIPES, 200 mM MgCl2, 14% PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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PDB entries from 2024-12-25

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