3H72
Crystal structure of Streptococcus pneumoniae D39 neuraminidase A precursor (NanA) in complex with NANA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4C |
Synchrotron site | NSLS |
Beamline | X4C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-18 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.981 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 158.630, 47.370, 137.060 |
Unit cell angles | 90.00, 116.41, 90.00 |
Refinement procedure
Resolution | 28.340 - 1.700 |
R-factor | 0.175 |
Rwork | 0.175 |
R-free | 0.20900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SnB (THEN SOLVE/RESOLVE) |
Refinement software | CNS (1.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.060 | 0.142 |
Number of reflections | 86773 | |
<I/σ(I)> | 13.0437 | 6.862 |
Completeness [%] | 89.5 | 82.9 |
Redundancy | 2.8 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 294 | 100 mM Hepes, 30% Jeffamine ED-2001, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K |