3GWQ
Crystal structure of a putative d-serine deaminase (bxe_a4060) from burkholderia xenovorans lb400 at 2.00 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-01-08 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97925 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 113.637, 113.637, 145.920 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.881 - 2.000 |
R-factor | 0.165 |
Rwork | 0.163 |
R-free | 0.20500 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.438 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.881 | 29.890 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.109 | 0.046 | 0.695 |
Total number of observations | 3444 | 23244 | |
Number of reflections | 64237 | ||
<I/σ(I)> | 11.1 | 34.4 | 1.8 |
Completeness [%] | 99.0 | 88.5 | 100 |
Redundancy | 4.9 | 4.6 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 1.0000M NaCitrate, 0.1M Cacodylate pH 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |