Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GVE

Crystal structure of calcineurin-like phosphoesterase YfkN from Bacillus subtilis

Experimental procedure
Experimental methodSAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-02-13
DetectorADSC QUANTUM 315r
Wavelength(s)0.97937
Spacegroup nameP 1 21 1
Unit cell lengths67.091, 92.505, 50.316
Unit cell angles90.00, 89.94, 90.00
Refinement procedure
Resolution31.536 - 1.250
R-factor0.154
Rwork0.154
R-free0.16300
Structure solution methodSAD
RMSD bond length0.018
RMSD bond angle1.508
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.5361.270
High resolution limit [Å]1.2501.250
Rmerge0.1160.686
Number of reflections169020
<I/σ(I)>8.52.9
Completeness [%]99.898.7
Redundancy9.17.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52770.1 M HEPES pH 7.5, 1.4 M Sodium citrate tribasic dihydrate, VAPOR DIFFUSION, SITTING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon