3GRR
Crystal Structure of the complex between S-Adenosyl Homocysteine and Methanocaldococcus jannaschi Dim1.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-08 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.385, 66.299, 62.061 |
Unit cell angles | 90.00, 107.76, 90.00 |
Refinement procedure
Resolution | 17.500 - 1.800 |
R-factor | 0.18732 |
Rwork | 0.182 |
R-free | 0.23377 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fyd chain A |
RMSD bond length | 0.009 |
RMSD bond angle | 1.123 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHENIX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.700 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.038 | 0.347 |
Number of reflections | 27022 | |
<I/σ(I)> | 18.7 | 4 |
Completeness [%] | 93.3 | 88.5 |
Redundancy | 4.59 | 4.45 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | PEG 8000 (14-16%), 25 MM MES, 50 MM NH2SO4, 7 MM MGCL2, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |