3GO3
Interactions of an echinomycin-DNA complex with manganese(II) ions
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2008-05-23 |
| Detector | MARMOSAIC 225 mm CCD |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 26.544, 26.544, 162.129 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.000 - 1.100 |
| R-factor | 0.162 |
| R-free | 0.19600 |
| Structure solution method | SAD |
| RMSD bond length | 0.017 |
| RMSD bond angle | 0.033 |
| Data reduction software | XDS |
| Data scaling software | SADABS |
| Phasing software | SHELXD |
| Refinement software | SHELXL-97 |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 1.200 |
| High resolution limit [Å] | 1.100 | 1.100 |
| Rmerge | 0.033 | 0.202 |
| Number of reflections | 23140 | |
| <I/σ(I)> | 24.06 | 4.44 |
| Completeness [%] | 92.2 | 76.5 |
| Redundancy | 5.2 | 2.17 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | 6 | 24% V/V PEG 200, 6% W/V PEG 3350, 16MM MANGANESE(II) CHLORIDE, 20MM SPERMINE TETRACHLORIDE, 0.1M MES BUFFER (PH 6.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K | ||
| 1 | 6 | 24% V/V PEG 200, 6% W/V PEG 3350, 16MM MANGANESE(II) CHLORIDE, 20MM SPERMINE TETRACHLORIDE, 0.1M MES BUFFER (PH 6.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K | ||
| 1 | 6 | 24% V/V PEG 200, 6% W/V PEG 3350, 16MM MANGANESE(II) CHLORIDE, 20MM SPERMINE TETRACHLORIDE, 0.1M MES BUFFER (PH 6.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | PEG 200 | ||
| 10 | 1 | 2 | spermine tetrachloride | ||
| 11 | 1 | 2 | MES | ||
| 12 | 1 | 2 | H2O | ||
| 2 | 1 | 1 | PEG 3500 | ||
| 3 | 1 | 1 | manganese(II) chloride | ||
| 4 | 1 | 1 | spermine tetrachloride | ||
| 5 | 1 | 1 | MES | ||
| 6 | 1 | 1 | H2O | ||
| 7 | 1 | 2 | PEG 200 | ||
| 8 | 1 | 2 | PEG 3500 | ||
| 9 | 1 | 2 | manganese(II) chloride |






