Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GI1

Crystal Structure of the laminin-binding protein Lbp of Streptococcus pyogenes

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2007-08-20
DetectorMAR345DTB
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths42.624, 92.163, 70.614
Unit cell angles90.00, 106.27, 90.00
Refinement procedure
Resolution27.982 - 2.450
R-factor0.19
Rwork0.186
R-free0.25100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1toa 1k0f 1pq4 1xvl 2o1e 3hh8
RMSD bond length0.015
RMSD bond angle1.560
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.2.33)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]27.98429.0902.530
High resolution limit [Å]2.4007.5902.400
Rmerge0.0980.0420.597
Total number of observations477121627
Number of reflections20587
<I/σ(I)>6.86113.91.2
Completeness [%]99.997.9100
Redundancy7.37.17.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.42910.7ul of 37 mg/ml Lbp in PBS, pH7.4 + 0.002% Na-azide + 0.7ul of 30% PEG1500, VAPOR DIFFUSION, SITTING DROP, temperature 291K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon