3GGD
Crystal structure of SAM-dependent methyltransferase (YP_325210.1) from ANABAENA VARIABILIS ATCC 29413 at 2.11 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-12 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.94645,0.97967 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 112.520, 112.520, 112.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.083 - 2.110 |
R-factor | 0.163 |
Rwork | 0.162 |
R-free | 0.17500 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.646 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.083 | 30.083 | 2.190 |
High resolution limit [Å] | 2.110 | 4.530 | 2.110 |
Rmerge | 0.221 | 0.090 | 1.530 |
Number of reflections | 42096 | 8021 | 8394 |
<I/σ(I)> | 11 | 27.8 | 2 |
Completeness [%] | 99.7 | 99.5 | 99.6 |
Redundancy | 17.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.01M cobalt chloride, 1.8M ammonium sulfate, 0.1M MES pH 6.5, ADDITIVE: 0.001 M S-ADENOSYLMETHIONINE (SAM), NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K |