3GG8
Crystal structure of the Toxoplasma gondii Pyruvate Kinase N terminal truncated
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ DW |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-17 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 109.023, 92.311, 112.443 |
Unit cell angles | 90.00, 105.57, 90.00 |
Refinement procedure
Resolution | 42.450 - 2.210 |
R-factor | 0.20923 |
Rwork | 0.206 |
R-free | 0.26516 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eoe |
RMSD bond length | 0.011 |
RMSD bond angle | 1.282 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.088 | 0.913 |
Number of reflections | 105806 | |
<I/σ(I)> | 2 | |
Completeness [%] | 97.9 | 96.3 |
Redundancy | 3.8 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 5 % PEG 3350, 0.1 M Succinic Acid, pH 7.0, 3 mM Chembridge #5175181, 20% glycerol, Vapor diffusion, hanging drop |