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3GFZ

Klebsiella pneumoniae BlrP1 pH 6 manganese/cy-diGMP complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]90
Detector technologyCCD
Collection date2007-01-01
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.98407
Spacegroup nameP 21 21 21
Unit cell lengths68.450, 97.090, 127.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.540 - 2.050
R-factor0.23105
Rwork0.229
R-free0.27151
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.008
RMSD bond angle1.596
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareREFMAC (5.2.0005)
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5402.150
High resolution limit [Å]2.0502.050
Rmerge0.0660.386
Number of reflections49739
<I/σ(I)>13.63.6
Completeness [%]93.281.9
Redundancy4.33.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5277protein in 5 mM cy-diGMP, 5 mM CaCl2, 25 mM Tris-HCl pH 8.0, 40 mM NaCl, 5 mM MgCl2, 2 mM EDTA, 2 mM DTE, 5% glycerol, reservoir 0.1 M Na-Ac buffer pH 4.5, 0.2 M Ca-acetate, 17-20%PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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