3GE5
Crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310) from porphyromonas gingivalis w83 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-14 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97870,0.97833 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 112.060, 112.060, 68.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.161 - 1.700 |
R-factor | 0.146 |
Rwork | 0.145 |
R-free | 0.17200 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.428 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.161 | 29.161 | 1.760 |
High resolution limit [Å] | 1.700 | 3.660 | 1.700 |
Rmerge | 0.066 | 0.022 | 0.735 |
Number of reflections | 48232 | 9139 | 8862 |
<I/σ(I)> | 14.75 | 47.7 | 1.8 |
Completeness [%] | 99.5 | 99.4 | 98 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 2.0000M (NH4)2SO4, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |