3G7Q
Crystal structure of valine-pyruvate aminotransferase AvtA (NP_462565.1) from Salmonella typhimurium LT2 at 1.80 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-12 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837, 0.97874, 0.97828 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 92.280, 92.280, 227.330 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.280 - 1.800 |
R-factor | 0.17886 |
Rwork | 0.178 |
R-free | 0.19577 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.589 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.285 | 29.290 | 1.860 |
High resolution limit [Å] | 1.800 | 3.870 | 1.800 |
Rmerge | 0.066 | 0.040 | 0.943 |
Number of reflections | 53916 | 10123 | 9237 |
<I/σ(I)> | 14.25 | 38.2 | 1.8 |
Completeness [%] | 99.8 | 99.7 | 98.2 |
Redundancy | 10.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | NANODROP, 40.0% Ethylene glycol, 0.1M Acetate pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |