Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3EOF

Crystal structure of putative oxidoreductase (YP_213212.1) from Bacteroides fragilis NCTC 9343 at 1.99 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2008-08-07
DetectorMARMOSAIC 325 mm CCD
Spacegroup nameP 21 21 21
Unit cell lengths69.370, 80.820, 101.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.760 - 1.990
R-factor0.171
Rwork0.169
R-free0.22400
Structure solution methodSAD
RMSD bond length0.018
RMSD bond angle1.660
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.76028.7602.080
High resolution limit [Å]1.9904.3202.010
Rmerge0.1070.0440.657
Number of reflections3936974936247
<I/σ(I)>7.1218.51.6
Completeness [%]96.897.484.7
Redundancy4.84
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.527710.0000% iso-Propanol, 20.0000% PEG-4000, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon