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3EN6

Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP102, a multitargeted kinase inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2007-07-01
DetectorADSC QUANTUM 315
Wavelength(s)1.000
Spacegroup nameP 1
Unit cell lengths42.439, 63.046, 74.579
Unit cell angles101.31, 91.17, 89.62
Refinement procedure
Resolution43.220 - 2.390
R-factor0.21277
Rwork0.210
R-free0.25858
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.659
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.3905.1702.390
Rmerge0.0820.0480.366
Number of reflections28471
<I/σ(I)>14.475
Completeness [%]96.199.681.1
Redundancy3.73.92.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829814 mg/mL kinase, 50 mM Tris-HCl, 100 mM NaCl, 5% (v/v) glycerol mixed 1:1 with 20% (w/v) glycerol precipitant well solution, pH 8.0, vapor diffusion, hanging drop, temperature 298K

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