3EFP
Crystal structure of the Escherichia coli twin arginine leader peptide binding protein DmsD in a monomeric form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2007-08-16 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 128.020, 128.020, 78.723 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.750 - 2.010 |
R-factor | 0.18 |
Rwork | 0.178 |
R-free | 0.21300 |
Starting model (for MR) | 1s9u |
RMSD bond length | 0.007 |
RMSD bond angle | 1.036 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (8.0SSI) |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.750 | 30.750 | 2.080 |
High resolution limit [Å] | 2.010 | 4.330 | 2.010 |
Rmerge | 0.089 | 0.036 | 0.362 |
Total number of observations | 29169 | 26522 | |
Number of reflections | 48639 | ||
<I/σ(I)> | 30.1 | 4.5 | |
Completeness [%] | 97.7 | 99.4 | 95.6 |
Redundancy | 5.72 | 5.65 | 5.58 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 1.25M ammonium sulfate, 12% glycerol, 0.1M Bis-Tris pH 6.5, 72 hours, VAPOR DIFFUSION, HANGING DROP, temperature 291K |