3E99
Crystal structure of the beta subunit of the benzoate 1,2-dioxygenase (benb, bmaa0186) from burkholderia mallei atcc 23344 at 1.90 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-07-31 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97822,0.97901 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 58.953, 58.953, 167.073 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.476 - 1.900 |
R-factor | 0.188 |
Rwork | 0.186 |
R-free | 0.22300 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.460 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.476 | 29.480 | 1.950 |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.073 | 0.040 | 0.509 |
Rmeas | 0.046 | 0.568 | |
Total number of observations | 786 | 5420 | |
Number of reflections | 14285 | ||
<I/σ(I)> | 7.03 | 13.4 | 1.4 |
Completeness [%] | 99.6 | 91 | 100 |
Redundancy | 5.2 | 4 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 15.0000% Glycerol, 0.1700M NaOAc, 25.5000% PEG-4000, 0.1M TRIS pH 8.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP |