3E54
Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2006-04-06 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 0.97911, 0.97945 |
| Spacegroup name | P 61 |
| Unit cell lengths | 66.580, 66.580, 217.910 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 45.160 - 2.500 |
| R-factor | 0.231 |
| Rwork | 0.231 |
| R-free | 0.25000 |
| Structure solution method | MAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.200 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.400 |
| High resolution limit [Å] | 2.320 | 2.320 |
| Rmerge | 0.068 | 0.252 |
| Number of reflections | 23652 | |
| Completeness [%] | 99.4 | 100 |
| Redundancy | 22.4 | 21.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 299 | 9% ethanol, 100mM MgCl2, 100mM HEPES-NaOH, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 299K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | ethanol | ||
| 2 | 1 | 1 | MgCl2 | ||
| 3 | 1 | 1 | HEPES-NaOH | ||
| 4 | 1 | 1 | H2O | ||
| 5 | 1 | 2 | MgCl2 | ||
| 6 | 1 | 2 | HEPES-NaOH | ||
| 7 | 1 | 2 | H2O |
