3E48
Crystal structure of a nucleoside-diphosphate-sugar epimerase (SAV0421) from Staphylococcus aureus, Northeast Structural Genomics Consortium Target ZR319
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-07-29 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97902 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.086, 67.188, 141.582 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.820 - 1.600 |
R-factor | 0.185 |
Rwork | 0.185 |
R-free | 0.20500 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.200 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELX (then SOLVE/RESOLVE) |
Refinement software | CNS (1.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.054 | 0.149 |
Number of reflections | 158683 | |
<I/σ(I)> | 28.5 | 5.1 |
Completeness [%] | 82.6 | 52.7 |
Redundancy | 5.1 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.1 | 291 | Protein solution: 10 mM Tris (pH 7.5), 100 mM sodium chloride, and 5 mM DTT. Reservoir solution: 100 mM Tris-HCl (pH 9.1), 18% PEG 3350, and 100 mM magnesium sulphate., VAPOR DIFFUSION, HANGING DROP, temperature 291K |