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3DW9

SgrAI with cognate DNA and manganese bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths58.261, 117.101, 63.702
Unit cell angles90.00, 112.96, 90.00
Refinement procedure
Resolution58.620 - 2.200
R-factor0.17678
Rwork0.174
R-free0.23957
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle1.946
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Refinement softwareREFMAC (5.5.0031)
Data quality characteristics
 Overall
High resolution limit [Å]2.200
Rmerge0.074
Number of reflections35508
<I/σ(I)>16
Completeness [%]88.6
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROPPEG4000, buffer, NaCl, MnCl2, VAPOR DIFFUSION, HANGING DROP
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG4000
211NaCl
311MnCl2
412PEG4000
512NaCl
612MnCl2

220113

PDB entries from 2024-05-22

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