3DJI
Crystal Structure of Macrophage Migration Inhibitory Factor Bound to an Acetaminophen Dimer Derived from NAPQI
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 94 |
Detector technology | IMAGE PLATE |
Collection date | 2008-05-02 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.974, 60.899, 77.806 |
Unit cell angles | 90.00, 93.28, 90.00 |
Refinement procedure
Resolution | 77.680 - 1.950 |
R-factor | 0.209 |
Rwork | 0.209 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3djh |
RMSD bond length | 0.010 |
RMSD bond angle | 1.457 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.000 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.070 | 0.443 |
Number of reflections | 47844 | |
<I/σ(I)> | 15.5 | |
Completeness [%] | 99.7 | 100 |
Redundancy | 3.6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 2 M Ammonium sulfate, 3% Isopropanol, 0.1 M Tris(hydroxymethyl)aminomethane, mixed with protein-inhibitor complex in a 1:1 ratio, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |